Test Data | Setup | Basic Usage | Uses | Plotting | Hypothesis Testing | Extracting Metadata | From the File Name | From the File Path | From MultiQC Configuration | Extracting Plot Data | Motivation | Listing Plots | Loading Plots | Converting Plot Data | Unnesting | Mapping with Purrr | Properly Handling Histogram Data | Custom Plot Parsers
Package: TidyMultiqc 1.0.3
TidyMultiqc: Converts 'MultiQC' Reports into Tidy Data Frames
Provides the means to convert 'multiqc_data.json' files, produced by the wonderful 'MultiQC' tool, into tidy data frames for downstream analysis in R. This analysis might involve cohort analysis, quality control visualisation, change-point detection, statistical process control, clustering, or any other type of quality analysis.
Authors:
TidyMultiqc_1.0.3.tar.gz
TidyMultiqc_1.0.3.zip(r-4.7-any)TidyMultiqc_1.0.3.zip(r-4.6-any)TidyMultiqc_1.0.3.zip(r-4.5-any)
TidyMultiqc_1.0.3.tgz(r-4.6-any)TidyMultiqc_1.0.3.tgz(r-4.5-any)
TidyMultiqc_1.0.3.tar.gz(r-4.7-any)TidyMultiqc_1.0.3.tar.gz(r-4.6-any)
TidyMultiqc_1.0.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
TidyMultiqc/json (API)
| # Install 'TidyMultiqc' in R: |
| install.packages('TidyMultiqc', repos = c('https://multimeric.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/multimeric/tidymultiqc/issues
Pkgdown/docs site:https://multimeric.github.io
Last updated from:035fcab407. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 138 | ||
| source / vignettes | OK | 176 | ||
| linux-release | OK | 135 | ||
| macos-release | OK | 154 | ||
| macos-oldrel | OK | 149 | ||
| windows-devel | OK | 75 | ||
| windows-release | OK | 86 | ||
| windows-oldrel | OK | 75 | ||
| wasm-release | OK | 119 |
Exports:list_plotsload_multiqc
Dependencies:assertthatclidplyrgenericsgluejsonlitelifecyclemagrittrpillarpkgconfigpurrrR6rlangstringistringrtibbletidyselectutf8vctrswithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| TidyMultiqc: Converting MultiQC reports into tidy data frames | TidyMultiqc-package |
| List the plot identifiers of all the plots in a given multiqc report | list_plots |
| Loads one or more MultiQC reports into a data frame | load_multiqc |